PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027155218.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 837aa MW: 96690.8 Da PI: 8.757 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 75.6 | 9.8e-24 | 62 | 152 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn Y+k +GF ++k+ k s ++g++ r+f Cs+egkr+e+ + +++ r++r+etrtgC a+l++k +k ++k++vt++++eHnH++a XP_027155218.1 62 EFYNLYGKLTGFGIKKADVKIS-QDGTVRYRKFACSREGKRHERYYNlAQRIRQPRPETRTGCLACLRIKHDKaSEKYVVTNFVKEHNHKMA 152 6****************99998.7888*****************9997888999*******************9***************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 837 aa Download sequence |
MDQEKGKNAV INLNEEDENC ELFSSSEEEF ISSETIEKNY PVDDMDEEVM NMVFDTEEDA 60 YEFYNLYGKL TGFGIKKADV KISQDGTVRY RKFACSREGK RHERYYNLAQ RIRQPRPETR 120 TGCLACLRIK HDKASEKYVV TNFVKEHNHK MASKSSIPYL WSHRHVTDAD YAQVRTMKMA 180 GVKTSQVMKF FAMQCGGYGN VGFVLKDLYN RVDKERRVLI EAGDAKNAIA YFNGRKASDK 240 SFIFEYDVDE ESRLKTLFWA DYESQLDYKC FGDVLIFDST YNVNEYHKPL VVFSGVNNHY 300 NTVVFGTALV SGESVEEYEW LLHTLTKTMG GRKPKAVITD GDKAMRRAIN NVFPDARHRL 360 CIWHLMKNAD AKAKSNVFKS MFGRMMKKAY PIGDLEEEWF AVLGKCGLRQ NKWVEKIFEM 420 RLLWAESLLR DTFFAGMRST QRCEQMNAFL KQYLKKNMRF YESVIIHELA LTHLRHTGAK 480 AVYETEDTIV VLATALQKLE KHASEVYTRN VFFRVKKHLN RQGLYDCYER KETWNGCIFF 540 LKKYADDRTW TVELNRRTLS LKCSCKKMEW KGLPCAHMFR VMLMENMQSI PKSCILKRWT 600 CEAREEADNE VLEGRQEIYA ELVQTARFGT LTSICKEMCF FASHMDDGFA RVRDIVIKET 660 NNWRRAWVER GFDCGTNGRL AADPKKSRLS QYCVKDPERT RAKGDRVHTN KNKAAKCGNC 720 GLRDGHNKRT CPRNLLSYDA CGISGSQAIH YSNPGSGTMG DSRFQFGASS SGDFQGVQHP 780 FLSHSGMLNR VDRDGSSSQK IDHSQSHTMQ SPWSEWNGTG SYTIADRNSY SASFWKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-95 | FAR1 family protein |