PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027155026.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 420aa MW: 48059.6 Da PI: 6.2238

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027155026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	108.5	7.8e-34	68	219	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk............................kvkaeekewyfFskrdkk 67 +p+G+rF Ptdeel+v+yL+k++++ +l+l + i+e+++y ++P++L + ++ + wyfF+ +k XP_027155026.1 68 MPRGYRFCPTDEELIVHYLRKRIAKAPLPL-NRIHEANVYGHNPQELTMtvdhentiiiemrfgvrgflidahryisDSLHNVNGWYFFTYLTNK 161 699*************************.77**********8558999***99999999988876542223677******* PP NAM 68 yatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 y++g+r++r + g+Wk tgkdk+++ +g++vg +k+L f gekt W mheyr+ XP_027155026.1 162 YPKGSRPSRsCGDGGFWKPTGKDKKIYY-NGNTVGYRKSLDFLL---GPGEKTAWKMHEYRI 219 *****666799*********.999*******5...45678******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MDNHQQQREE QPYLLHDHLL HHHWPPLQGQ QQQPLQHQHP LYLLNDQQQP VPQGKILHEN 60 SQNFLDSMPR GYRFCPTDEE LIVHYLRKRI AKAPLPLNRI HEANVYGHNP QELTMTVDHE 120 NTIIIEMRFG VRGFLIDAHR YISDSLHNVN GWYFFTYLTN KYPKGSRPSR SCGDGGFWKP 180 TGKDKKIYYN GNTVGYRKSL DFLLGPGEKT AWKMHEYRIH ANNPKSDPVL CRLYMNIRRK 240 KKDESEGDTV ELMRENLDQC FTVNEAPMQN EDNDLAVGNI SSAGSTNNQC MEYITSTLDT 300 GGDANSNQVI YDLSSFQFPD HPFQDFQGYT NSHGGLEAIT QEFTEPFHLS KGTMMPSNLS 360 TEPFHLSRGT MIPSDLNMED VSKYAIGGTD LSDLAWQNGC AGGYVNMTSL QIDGENSGYK

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MDNHQQQREE QPYLLHDHLL HHHWPPLQGQ QQQPLQHQHP LYLLNDQQQP VPQGKILHEN  60
SQNFLDSMPR GYRFCPTDEE LIVHYLRKRI AKAPLPLNRI HEANVYGHNP QELTMTVDHE  120
NTIIIEMRFG VRGFLIDAHR YISDSLHNVN GWYFFTYLTN KYPKGSRPSR SCGDGGFWKP  180
TGKDKKIYYN GNTVGYRKSL DFLLGPGEKT AWKMHEYRIH ANNPKSDPVL CRLYMNIRRK  240
KKDESEGDTV ELMRENLDQC FTVNEAPMQN EDNDLAVGNI SSAGSTNNQC MEYITSTLDT  300
GGDANSNQVI YDLSSFQFPD HPFQDFQGYT NSHGGLEAIT QEFTEPFHLS KGTMMPSNLS  360
TEPFHLSRGT MIPSDLNMED VSKYAIGGTD LSDLAWQNGC AGGYVNMTSL QIDGENSGYK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	243	RRKKKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-29	NAC family protein