PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027154642.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 526aa MW: 56995.9 Da PI: 7.9608

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027154642.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.1	8.7e-34	234	290	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ d++v+ei+Y+g+Hnh+ XP_027154642.1 234 DDGYNWRKYGQKQVKGSEYPRSYYKCTHPSCPVKKKVERSH-DGQVTEIIYKGQHNHQ 290 8**************************************.*************8 PP
2	WRKY	107	9.6e-34	413	471	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gC+v+k+ver+a+dpk+v++tYeg+Hnh+ XP_027154642.1 413 LDDGYRWRKYGQKVVKGNPYPRSYYKCTSQGCNVRKHVERAASDPKAVITTYEGKHNHD 471 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MAENDGSSSR APTRPTISLP PRTAMESLFT GGPGASPGPM TLVSSFFSDN DPDSECRSFS 60 QLLAGAMGSP VAVPALRQNF QQPGNSSSRE KVSSSGAGDA DFRFKQSRPT GLVVTQPAMF 120 TVPPGLSPAS LLDSPGFFSS GQGAFGLSHQ QVLAQVTAQA AQGQAHMQTP AEYPSLSSAP 180 APPSSQLQSL TSSTTTPQQM PPPVPDPNII KASSDVPQLD ERLQPSITVD KPADDGYNWR 240 KYGQKQVKGS EYPRSYYKCT HPSCPVKKKV ERSHDGQVTE IIYKGQHNHQ PPQHMKRAKD 300 SGNPNGTFNL QGNSELGSMG RSENLNMNRE GFPSHSLALK DQESSQATPE QVSGSSDSEE 360 VGNAENGVET RDNDEPESKR RNIEVQTSEP ASSHRTVTEP RIIVQTTSEV DLLDDGYRWR 420 KYGQKVVKGN PYPRSYYKCT SQGCNVRKHV ERAASDPKAV ITTYEGKHNH DVPATKSSSH 480 STASMASELK PPTTLVNNQS LTRRAEFKNN GPQPIASLRF KEEQIT

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MAENDGSSSR APTRPTISLP PRTAMESLFT GGPGASPGPM TLVSSFFSDN DPDSECRSFS  60
QLLAGAMGSP VAVPALRQNF QQPGNSSSRE KVSSSGAGDA DFRFKQSRPT GLVVTQPAMF  120
TVPPGLSPAS LLDSPGFFSS GQGAFGLSHQ QVLAQVTAQA AQGQAHMQTP AEYPSLSSAP  180
APPSSQLQSL TSSTTTPQQM PPPVPDPNII KASSDVPQLD ERLQPSITVD KPADDGYNWR  240
KYGQKQVKGS EYPRSYYKCT HPSCPVKKKV ERSHDGQVTE IIYKGQHNHQ PPQHMKRAKD  300
SGNPNGTFNL QGNSELGSMG RSENLNMNRE GFPSHSLALK DQESSQATPE QVSGSSDSEE  360
VGNAENGVET RDNDEPESKR RNIEVQTSEP ASSHRTVTEP RIIVQTTSEV DLLDDGYRWR  420
KYGQKVVKGN PYPRSYYKCT SQGCNVRKHV ERAASDPKAV ITTYEGKHNH DVPATKSSSH  480
STASMASELK PPTTLVNNQS LTRRAEFKNN GPQPIASLRF KEEQIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-165	WRKY family protein