PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027154291.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 315aa    MW: 36039.3 Da    PI: 7.0346
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027154291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.61.2e-321972255
         G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    prlrWtp+LH++Fv+a+e+LGG+ekAtPk +l++m+v gLt++hvkSHLQ+YR+
  XP_027154291.1 19 PRLRWTPDLHHCFVHAIERLGGQEKATPKLVLQMMDVRGLTISHVKSHLQMYRS 72
                    8****************************************************7 PP
2Myb_DNA-binding47.93e-152071148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT++++  +v+a+++lGg    t+k++ ++m   g+t  ++ks++q+y+
   XP_027154291.1 20 RLRWTPDLHHCFVHAIERLGGQekaTPKLVLQMMDvRGLTISHVKSHLQMYR 71
                     89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MGSCGRNGGV RQYIRSKVPR LRWTPDLHHC FVHAIERLGG QEKATPKLVL QMMDVRGLTI  60
SHVKSHLQMY RSMKNDVARQ DRNITIEPRK QQSVQDLHEG GVEQENNMVY LHPFSDSQFI  120
YNPPPTKRAR IEKMSSISEK LQRCQRIRES VTYDPYGDDD YGQTTAEKSG MIKEKEEGRR  180
DFRWWQQTHE TATPIHIPFS LPQDFFQTLN PSSNAGPMEE SHPFSKVANQ EEVKFEPSKT  240
GKSQNLIEKH YVQEETDDCG LSLSLSLHHP STQISNVSST SEISEAISSY SRNFNDCSGS  300
YLVQHTVNLD LSIAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.13e-34G2-like family protein