PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027153972.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Dof | ||||||||
Protein Properties | Length: 347aa MW: 36700.9 Da PI: 8.625 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.3 | 1.9e-39 | 72 | 130 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCdstntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ XP_027153972.1 72 PENLRCPRCDSTNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSA 130 57899***************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MIQELLGEAA SGVLTGGERS KLPVDNGVSG VSSASPSLSP SPTPSPSPSP SPSPSPSSSA 60 VTLPPPTGSS TPENLRCPRC DSTNTKFCYY NNYNLTQPRH FCKTCRRYWT KGGALRNVPI 120 GGGCRKNKSA MITSSVIKSS AGKFKTMATE MGKSSFLSAF EHELSSSSPS SNPILWASPQ 180 NSHLFSLLKA NQSPNPNASP MSNSVVNTSM KKEEAAMPAG CYSLNACSRM VGFDSELGQQ 240 VPSVGLISSS SGWRNSEQHQ QQQIGFVLGQ GEFTGVQDFY QRLRSSRNCT YPDHAPVVLG 300 NVVSSSSSSS SSIQVLDSAP VAVAESGYWN SILSSWSDMP TTNGAYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 1e-33 | Dof family protein |