PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027153793.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 347aa MW: 36673.9 Da PI: 8.625

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027153793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.3	1.9e-39	72	130	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCdstntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ XP_027153793.1 72 PENLRCPRCDSTNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSA 130 57899***************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MIQELLGEAA SGVLTGGERS KLPVDNGVSG VSSASPSLSP SPTPSPSPSP SPSPSPSSSA 60 VTLPPPTGSS TPENLRCPRC DSTNTKFCYY NNYNLTQPRH FCKTCRRYWT KGGALRNVPI 120 GGGCRKNKSA MITSSVIKSS AGKFKTMATE MGKSSFLSAF EHELSSSSPS SNPILWASPQ 180 NSHLFSLLKA NQSPNPNASP MSNSVVSTSM KKEEAAMPAG CYSINACSRM VGFDSELGQQ 240 VPSVGLISSS SGWRNSEQHQ QQQIGFVLGQ GEFTGVQDFY QRLRSSRNCT YPDHAPVVLG 300 NVVSSSSSSS SSIQVLDSAP VAVAESGYWN SILSSWSDMP TTNGAYP

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MIQELLGEAA SGVLTGGERS KLPVDNGVSG VSSASPSLSP SPTPSPSPSP SPSPSPSSSA  60
VTLPPPTGSS TPENLRCPRC DSTNTKFCYY NNYNLTQPRH FCKTCRRYWT KGGALRNVPI  120
GGGCRKNKSA MITSSVIKSS AGKFKTMATE MGKSSFLSAF EHELSSSSPS SNPILWASPQ  180
NSHLFSLLKA NQSPNPNASP MSNSVVSTSM KKEEAAMPAG CYSINACSRM VGFDSELGQQ  240
VPSVGLISSS SGWRNSEQHQ QQQIGFVLGQ GEFTGVQDFY QRLRSSRNCT YPDHAPVVLG  300
NVVSSSSSSS SSIQVLDSAP VAVAESGYWN SILSSWSDMP TTNGAYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	9e-34	Dof family protein