PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027153369.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 268aa    MW: 28984.3 Da    PI: 7.0477
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027153369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.8e-11167214455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_027153369.1 167 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 214
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MDPQASYNLG CDTAAYNLAE IWPFPMNNGP GPGPGASAAT SFHNTNDFVA TMSMNMNVNS  60
GVNRDRDPMV MEQAPNPTPN SSGGGGARRR RDEDEAVKGV SNSSNGNAMK ACDSKKLKTA  120
GAHENREAEA EGEANSGKAA EPSPKPAEPP KQDYIHVRAR RGQATDSHSL AERARREKIS  180
ERMKILQDLV PGCNKVIGKA LVLDEIINYI QSLQRQVEFL SMKLEAVNSR LSPGIEGFPS  240
KDAVREYARG TSPDWLHMQI GGGFERSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
188118RRRRDEDEAVKGVSNSSNGNAMKACDSKKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-69bHLH family protein