PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027152868.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ARR-B | ||||||||
Protein Properties | Length: 592aa MW: 66780.5 Da PI: 5.632 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 77.3 | 2e-24 | 202 | 255 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_027152868.1 202 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMGVPWLTRENVASHLQKYRL 255 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 41.3 | 3.5e-13 | 204 | 254 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I mg +t++++ s++qky+ XP_027152868.1 204 RVVWTVDLHQKFVKAVNQIGFDkvGPKKILDLMGvPWLTRENVASHLQKYR 254 678***********************************************7 PP | |||||||
3 | Response_reg | 81.3 | 3.1e-27 | 23 | 131 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ +++al+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_027152868.1 23 VLVVDDDPTWLKILEKMLKKCSY-EVTTCGLARDALNLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 115 89*********************.***************999999**********************6644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_027152868.1 116 ACDYLLKPIRMKELRN 131 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 592 aa Download sequence |
MMITENTGFS SPRSDAFPAG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLARDALNLL 60 RERKDGFDIV ISDVNMPDMD GFKLLEHVGL EMDLPVIMMS VDGETSRVMK GVQHGACDYL 120 LKPIRMKELR NIWQHVFRKR IHEVRDIEFH EGIDEIHLMK NGSDLSEDRH LPSGIDSFSG 180 KKRKEAEKHD DRECNDPSSV KKARVVWTVD LHQKFVKAVN QIGFDKVGPK KILDLMGVPW 240 LTRENVASHL QKYRLYLGRL QKEKELTTSF GGMKDSDISA KEPNGNHCLH DLVNKQQCDL 300 ASGSYNIQGN KNMIQNVDLK MHEADLKCTV PKPMEEPKKA IDGESSYPQK SSSKKMSLNH 360 SFGQFDSDLE FAAVIPKQYP WNEETSQAQF SRERKPHFQP KRGFNTLPPT CLPENIQLDC 420 VQPSSSPNSR PSSIDRDKLA EAEMKPAYVK NRSQGIEQLS PAGCDADLFS AQPGSKLTNN 480 QAFKPTQSAV WSMNNHSLDE ILEGGMESAG RSLNFASGTD YTSWDENVHS GSLQGDFQPV 540 STGPQGIEFL NYSEPELTTE VPTFLYDSLK FDSEYPFDSM EYPVIDQGLF IV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-124 | ARR-B family protein |