PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027152581.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 308aa MW: 34678.1 Da PI: 9.726 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.8 | 1.4e-14 | 135 | 179 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky XP_027152581.1 135 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 179 8*****************************99************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 308 aa Download sequence |
MKWEMEILPP ASYLSNSGWL VEESKSTKWT PAENKAFENA LAVFDKDTPD RWQKVAAVVP 60 GKTVMDVIRQ YKELVDDVSN IEAGLIPIPG YGTSPFTLEW GSGHNFDGYK QSFIATGKRS 120 SAPRPSEQER KKGVPWTEEE HKLFLMGLKK YGKGDWRNIS RNFVITRTPT QVASHAQKYF 180 IRQLSGGKDK RRASIHDITT VNLNDNQIPS PDRKKSSSPD TSNVISQQQP NSTAMHKMAF 240 QWNQGNSNGA VMNFNMGHGN IFMPPHGVNS CDLKMQGQDL QRGGMHNSYV GCQNMVFQMQ 300 STHQYPHA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G58900.1 | 1e-106 | MYB_related family protein |