PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027152561.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 431aa MW: 48562.7 Da PI: 6.263

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027152561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	143.2	1.5e-44	96	221	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 ppG+rF P d+el+v+yLkkk+ g+ l+ + i+ev++y+ +P ++ + + ++++w+fF++rdkky +g+r+nra+ +gyWkatg dk++++ XP_027152561.1 96 PPGYRFCPMDSELIVCYLKKKILGELLPR-NQIREVNLYRQNPDTISgRYPSMGDNQWFFFTPRDKKYLNGSRPNRAAGTGYWKATGADKNIHC- 188 9***********************999.77**********9555566999**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g +vg++ktLvfy+gr pkg+kt+W+mheyr+ XP_027152561.1 189 NGVTVGVRKTLVFYEGRPPKGVKTSWIMHEYRV 221 99***************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MASGHESFPQ IEASADTSTA VNVITSPGAH ACAHHLRKDH ENVLSGLNNT STTLSSPSDS 60 RLVDNGNKNH NVVKDDDDAY NNDAIDRDKD YFDTFPPGYR FCPMDSELIV CYLKKKILGE 120 LLPRNQIREV NLYRQNPDTI SGRYPSMGDN QWFFFTPRDK KYLNGSRPNR AAGTGYWKAT 180 GADKNIHCNG VTVGVRKTLV FYEGRPPKGV KTSWIMHEYR VLGHHKSKSA NDMRLDDYVL 240 CKIYKKNHKS FKARQRNDEN PGSFNQSNDG NPDDELGEEK GSLFDPPPGS NEQSGCPYTY 300 QANYTYPHLE SFYQYPPSEQ FPMLAGIQPL SIEPATNPDI AKYISNFPPH YYHHGAKPIS 360 SFMHPSSFLP IPPVNPAWIY ELVQDNLDLP MDFTDYGNTN SVDPYLDLDK LSSHGFESPS 420 MPQDSRGSQD S

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MASGHESFPQ IEASADTSTA VNVITSPGAH ACAHHLRKDH ENVLSGLNNT STTLSSPSDS  60
RLVDNGNKNH NVVKDDDDAY NNDAIDRDKD YFDTFPPGYR FCPMDSELIV CYLKKKILGE  120
LLPRNQIREV NLYRQNPDTI SGRYPSMGDN QWFFFTPRDK KYLNGSRPNR AAGTGYWKAT  180
GADKNIHCNG VTVGVRKTLV FYEGRPPKGV KTSWIMHEYR VLGHHKSKSA NDMRLDDYVL  240
CKIYKKNHKS FKARQRNDEN PGSFNQSNDG NPDDELGEEK GSLFDPPPGS NEQSGCPYTY  300
QANYTYPHLE SFYQYPPSEQ FPMLAGIQPL SIEPATNPDI AKYISNFPPH YYHHGAKPIS  360
SFMHPSSFLP IPPVNPAWIY ELVQDNLDLP MDFTDYGNTN SVDPYLDLDK LSSHGFESPS  420
MPQDSRGSQD S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	3e-54	NAC family protein