PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027151808.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 281aa MW: 32613.7 Da PI: 7.8841

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027151808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63	8.7e-20	171	260	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+Y+k +GFsv+k+ kk+ +++ r++vCs+ +r++++++ + +++++r+etr+gC a++++k +k ++k++v+++++e nH++ XP_027151808.1 171 DFYNAYGKVAGFSVTKADVKKN-AGYTTKYRKMVCSRVARRDKKTNErDYQKKQPRPETRVGCPACFRIKYDKnKDKYMVIDFVKEYNHKM 260 6***************9999.56668999***9999988876789999**************999************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MNDEKGKRPE GNLNRHNIVA GEMCNSNESE YEIELGAKDA QIKHGESYII DDMEVAEVMT 60 MTFNNEEDAY DFYNAYGKVA GFSVRKADAK KNAGYTTKMK MNDKKGKRPE SNLNRHNIVA 120 GEMRNFNESE HEIELGVKDA QIEHRESYII DDMEVVEVMT MMFQNEEDAY DFYNAYGKVA 180 GFSVTKADVK KNAGYTTKYR KMVCSRVARR DKKTNERDYQ KKQPRPETRV GCPACFRIKY 240 DKNKDKYMVI DFVKEYNHKM PSKACVTYLR SHRKVTDADY A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-12	FAR1 family protein