PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027151694.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 292aa    MW: 32120 Da    PI: 5.6258
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027151694.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH192.5e-0621531955
                    HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     f+ Lrel+P++    ++K + a+ L ++++Y+++Lq
  XP_027151694.1 21 IFQILRELIPHS----DQKRDTASFLLEVIQYVQYLQ 53
                    599********9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MRGEKDLVFP VLMVGAIIVS IFQILRELIP HSDQKRDTAS FLLEVIQYVQ YLQEKVQKYE  60
GSYQAWNSEP TKLMPWRNSH WRTQSFVSHP QTMKNGSGSG PLYPGRLEDN NITVSSTVQP  120
SQQNPIESDL GREVTSKTID QQTELTNQAM PMPMPLQAAM PVPIQNDGAF SHSQPRPAPD  180
AQSSDCPITD DMLNHPEGLT IEGGTISISS IYSQGLLNTL TQALQTAGVD LSQATVSVQI  240
NLGKRANSGL ASGISVTKDH ERPSPSGDQL AGQYRDTSNG EDFSQAQKRL KR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.19e-60bHLH family protein