PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027151647.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 398aa    MW: 44556.4 Da    PI: 4.784
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027151647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38e-18125174255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f tae Aa+a++  +++++g
  XP_027151647.1 125 HYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEAAARAYDTEARRIRG 174
                     7********.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MCGGAIISDY IQPSRSSHRL TADLLWGIGG GGDLPDSKKD IKKKKNTSNF YSKQLRSEII  60
DLDDEFEADF REFSDQAVEE LEDVKPFGFS ASKHSAILSR GTKCGNASDS SDESGKYLKR  120
KRKNHYRGIR QRPWGKWAAE IRDPRKGVRV WLGTFNTAEA AARAYDTEAR RIRGKKAKLN  180
FPDETQLSAS RRTVVANPQK VRVKEDQSQV QPSLNESMTF MSNIENDHCN SLNLVEEKPP  240
AKQFSSVDAY PTVGDMEFKS YFQSDCANPC FNSDQGSSSF GCSDFGWEEQ CPKTPEISSI  300
FSSAIDWEEP QFVEDANSSK KLKTSPLDLV PADDNNKKLS EEFSAFESQM KVVQMPYLEG  360
NWDASLDAFL NGVAVQDGGD EMDLWTFDDI SAMMGGVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.31e-60ERF family protein