PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027150731.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Trihelix

Protein Properties

Length: 401aa MW: 45577.5 Da PI: 5.2645

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027150731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	81.4	1.2e-25	86	167	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++aLi +rre+++ ++++k++k+lW+++s kmre+gf rsp++C++kw+nl k++kk+k++ ++ s +++y++++e XP_027150731.1 86 WVQEETRALISLRREIDSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKVKQNGDRN---GSAKMSYYKEIE 167 **************************************************************999874...566899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MYVSEQPPRA IDFYKEEDNP ETATGDMIIE VSTANNHLPP PQHRQVLGVG GGGDTTSSGG 60 EDNTNTTHPL SSSSDLKAPK KRAETWVQEE TRALISLRRE IDSLFNTSKS NKHLWDQISL 120 KMREKGFDRS PTMCTDKWRN LLKEFKKVKQ NGDRNGSAKM SYYKEIEEIL RERSKNSSSY 180 KSPPPTSSNK VDSFMQFSDK GIDDTSITFE TVEGDGRQPL NLERRLDHDG HPLAITATEA 240 VAASEVSPWN WRENPGNGHQ NASYEGRVIS VKWGDYTKRI GIDGTPDGIK EAIKATFRLR 300 TKRAFWLEDD NNIVRTLDRD MPLGNYTLHV DEGLTIKFCL YEEADDLPVH TEDKTFYSED 360 DFRDFLSRRG WTCLREYDGY RNIDSLDDLC PGAVYRGVNL G

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MYVSEQPPRA IDFYKEEDNP ETATGDMIIE VSTANNHLPP PQHRQVLGVG GGGDTTSSGG  60
EDNTNTTHPL SSSSDLKAPK KRAETWVQEE TRALISLRRE IDSLFNTSKS NKHLWDQISL  120
KMREKGFDRS PTMCTDKWRN LLKEFKKVKQ NGDRNGSAKM SYYKEIEEIL RERSKNSSSY  180
KSPPPTSSNK VDSFMQFSDK GIDDTSITFE TVEGDGRQPL NLERRLDHDG HPLAITATEA  240
VAASEVSPWN WRENPGNGHQ NASYEGRVIS VKWGDYTKRI GIDGTPDGIK EAIKATFRLR  300
TKRAFWLEDD NNIVRTLDRD MPLGNYTLHV DEGLTIKFCL YEEADDLPVH TEDKTFYSED  360
DFRDFLSRRG WTCLREYDGY RNIDSLDDLC PGAVYRGVNL G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-160	Trihelix family protein