PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027150726.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 339aa MW: 37985.3 Da PI: 4.7741

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027150726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.8	4.4e-09	282	316	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+++gL+++q+ +WF N+R ++ XP_027150726.1 282 KWPYPTEADKISLAESTGLDQKQINNWFINQRKRH 316 679*****************************885 PP
2	ELK	30.9	6e-11	236	257	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK+ LlrKY+ +++sLk EFs XP_027150726.1 236 ELKETLLRKYGNHISSLKLEFS 257 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MDEMYDLHSS GHDYADKALI SPENLMMAAD YSYQSFISPS NDHHRIHIYG SDDHVAAAAA 60 AASRFQCSAS ISEAASITPE DIQRGSSRCG FGGEDDIHAA EDACSVIKAK IASHPSYPKL 120 LDAYIDCQKV GAPPEIAGFL DEIRRENGGF CKGDAISTCL GADPELDEFM ETYYDILVKY 180 KSDLSRPFNE ATTFLNKIEM QLGNLCKDDG AVSSDDELSG VETDVQDSQT KAEDRELKET 240 LLRKYGNHIS SLKLEFSKKK KKGKLPKEAR QILLEWWNVH YKWPYPTEAD KISLAESTGL 300 DQKQINNWFI NQRKRHWKPS ENMQLAVMDS LSGQFFADD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-123	TALE family protein