PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027150714.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB_related | ||||||||
Protein Properties | Length: 338aa MW: 36616.1 Da PI: 9.7969 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.5 | 3.1e-13 | 101 | 145 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky XP_027150714.1 101 PWTEDEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 145 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence |
MASSCSLQCG NDGQNCWQTC PEVSGAGPAA AAAAEGCNKG FMLFGVRVME GSFRKSASMN 60 NLAQFEQPQD SMNNNDVNAG YASDDVVHPS ARNRERKRGV PWTEDEHRLF LLGLQKVGKG 120 DWRGISRNFV KTRTPTQVAS HAQKYFLRRN NHSRRRRRSS LFDITTDTVL GSAMEDRTQE 180 ESVPQPAMQQ QKNLINNLEK FPMSTYPTNI APVMLPVSPV KGASSLESLT LGPANNQLLL 240 NRTNNASSPT PKLIRPIPLA PIPPSSKMAD LNLNKTTIPD PLPLSLKLST PSSSAASQPS 300 SEQHSPSSSS PPARHTSPFQ AMPSSFDNSS GDSIISVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G70000.2 | 2e-65 | MYB_related family protein |