PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027150674.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 514aa MW: 55655 Da PI: 5.3763

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027150674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	1e-39	149	209	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_027150674.1 149 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSV 209 7899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MSEAKDPAIK LFGKTIQLPE APAAAAASEC GGDASALSND ISADDTLVQD RPSSPDSLPE 60 DSNLDRSGAE EESDKMQDFS GEKGNDSKTE DGAQSMMPEE LIDPTLSSLT KESSKAPSVD 120 SEAAPAKASK AEDEQNETSN SQDKTLKKPD KILPCPRCNS MDTKFCYYNN YNVNQPRHFC 180 KNCQRYWTAG GTMRNVPVGA GRRKNKNSVS QYRHISVSET LHNSQPDLPN GIHHPTLKPN 240 GTVLTFGSDA PLCESMASVL NIAEKTMQNC TRNGFHRPEE LRIPVPYGTG GNGDEHLSGS 300 SVTTLSSKDE ASKDSLPDKQ MPNCQSISPQ VPCFPGAPWP PYPWNCIPWG SSVPPAAFCP 360 PGFPMQFYPA APYWGCTVPG TWTVPWLSPP PTSQNLNSRT SGPNSPTLGK HSRDDSIMKP 420 VDSKKEEPQK ESNPEKCLWV PKTLRIDDPG EAARSSIWAT LGIKIDKVDS VGGAGLFKAF 480 QPKGDEKTRV SETSTVLQAN PAALSRSLSF HEML

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MSEAKDPAIK LFGKTIQLPE APAAAAASEC GGDASALSND ISADDTLVQD RPSSPDSLPE  60
DSNLDRSGAE EESDKMQDFS GEKGNDSKTE DGAQSMMPEE LIDPTLSSLT KESSKAPSVD  120
SEAAPAKASK AEDEQNETSN SQDKTLKKPD KILPCPRCNS MDTKFCYYNN YNVNQPRHFC  180
KNCQRYWTAG GTMRNVPVGA GRRKNKNSVS QYRHISVSET LHNSQPDLPN GIHHPTLKPN  240
GTVLTFGSDA PLCESMASVL NIAEKTMQNC TRNGFHRPEE LRIPVPYGTG GNGDEHLSGS  300
SVTTLSSKDE ASKDSLPDKQ MPNCQSISPQ VPCFPGAPWP PYPWNCIPWG SSVPPAAFCP  360
PGFPMQFYPA APYWGCTVPG TWTVPWLSPP PTSQNLNSRT SGPNSPTLGK HSRDDSIMKP  420
VDSKKEEPQK ESNPEKCLWV PKTLRIDDPG EAARSSIWAT LGIKIDKVDS VGGAGLFKAF  480
QPKGDEKTRV SETSTVLQAN PAALSRSLSF HEML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-102	Dof family protein