PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027150533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 121aa MW: 14258.7 Da PI: 5.2975 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 29 | 3.4e-09 | 26 | 71 | 1 | 47 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 kfYn+YA ++ Fs rk++ +k ++g +t r++ C keg +++ + + XP_027150533.1 26 KFYNKYAFKMDFSRRKDYLNKD-KDGVTTYRRYSCCKEGVKRKYEGD 71 6*****************9998.8899************99988776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MNCSKLTEDR IPELGTEFNS EEDAYKFYNK YAFKMDFSRR KDYLNKDKDG VTTYRRYSCC 60 KEGVKRKYEG DVSELESTSV SFDEHMFMGY RSSTDSVSER NNTYGLRLTT HINSTQLQVD 120 E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 9e-09 | FAR1 family protein |