PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027150472.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 862aa MW: 97884.5 Da PI: 8.9057

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027150472.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.7	1.8e-18	91	180	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y YA+ +GF vrk ++k ++g + r + C+keg+r+e++ + ++ r+++a+tr++C+a+lkv++++ ++k++v+++++ H H l+ XP_027150472.1 91 LYMMYARATGFGVRKGCKRKD-KKGIVRVRSWLCNKEGERHEKHLNrGDRIREPKAVTRVKCEAHLKVRLHEsKEKYVVAEFVSGHCHRLC 180 699***********98888.7777************99885678899**************99***************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 862 aa Download sequence
MKQTGLRMRM VEGHPWSTRD VAASAEGEES GNRLKIVHST TNCRTERILG DGAIGDIVGE 60 DGPNVNAAFH CIDDIDVGSM EFDSIEEAEA LYMMYARATG FGVRKGCKRK DKKGIVRVRS 120 WLCNKEGERH EKHLNRGDRI REPKAVTRVK CEAHLKVRLH ESKEKYVVAE FVSGHCHRLC 180 SPESVSFMRS HRKVGKSDLQ QAVLMQQAGI RTSHIMRLLA VQAGEYRNLG FHETDMYNAL 240 NRQRQVAVGD GDSDSALAFL LGKQRGDPNL FFKYSVDGHG RLNRLLWADS VCRDDYRCFG 300 DVLVFDSTYN TNQYRFPLVV LCGVNNHYST CIFACAFIVR EGDEGYDWVI STFLEAMNGR 360 KPIAVVTDGD KSMRKCIKKL MPTAKHRLCS FHLEMNAATN VRDKEFLQAF KTCMFMNSTI 420 PNFETRWAGV VRRFRLENNE WVKKMYRKRE LWAMAFLRGN FFGGVRSTQR CEKMHQVLKL 480 HLTPKLKFFE CLQTYDLAVG RLRHEERRQR AVTEHTTLLG ATQLQALEKH AAEVFTRSTF 540 VVVREEMKKQ GLFCRMNGTD DGINAVHFMK HPYNYSYYTV VYNRSTRHMK CSCLKMETHG 600 LPCCHMFRAM LFEELKKIPP NCIMKRWTRQ AKECVISEEG PETSSSHLTE MSRYSTLLSA 660 ANDVCRNACK TSDRFRNALE LFQNESVGTE QVQGKRQRGQ GCGAVQLTKQ TGGQRDWVKD 720 PEFIESRVLC RGKPRGRGSV PNASSKRRAT DADDHHGNCS CTADAQQRNT GTTPAGRIGV 780 ELSIEMEQQR PRDPVLRIQD MDEGGPDGVR QGKSLESGLP GSVDGFLGYI LHSSRTSSYQ 840 VDEPRNVPAD GLVPASTDIA DW

Sequence ? help Back to Top

Protein Sequence Length: 862 aa Download sequence

MKQTGLRMRM VEGHPWSTRD VAASAEGEES GNRLKIVHST TNCRTERILG DGAIGDIVGE  60
DGPNVNAAFH CIDDIDVGSM EFDSIEEAEA LYMMYARATG FGVRKGCKRK DKKGIVRVRS  120
WLCNKEGERH EKHLNRGDRI REPKAVTRVK CEAHLKVRLH ESKEKYVVAE FVSGHCHRLC  180
SPESVSFMRS HRKVGKSDLQ QAVLMQQAGI RTSHIMRLLA VQAGEYRNLG FHETDMYNAL  240
NRQRQVAVGD GDSDSALAFL LGKQRGDPNL FFKYSVDGHG RLNRLLWADS VCRDDYRCFG  300
DVLVFDSTYN TNQYRFPLVV LCGVNNHYST CIFACAFIVR EGDEGYDWVI STFLEAMNGR  360
KPIAVVTDGD KSMRKCIKKL MPTAKHRLCS FHLEMNAATN VRDKEFLQAF KTCMFMNSTI  420
PNFETRWAGV VRRFRLENNE WVKKMYRKRE LWAMAFLRGN FFGGVRSTQR CEKMHQVLKL  480
HLTPKLKFFE CLQTYDLAVG RLRHEERRQR AVTEHTTLLG ATQLQALEKH AAEVFTRSTF  540
VVVREEMKKQ GLFCRMNGTD DGINAVHFMK HPYNYSYYTV VYNRSTRHMK CSCLKMETHG  600
LPCCHMFRAM LFEELKKIPP NCIMKRWTRQ AKECVISEEG PETSSSHLTE MSRYSTLLSA  660
ANDVCRNACK TSDRFRNALE LFQNESVGTE QVQGKRQRGQ GCGAVQLTKQ TGGQRDWVKD  720
PEFIESRVLC RGKPRGRGSV PNASSKRRAT DADDHHGNCS CTADAQQRNT GTTPAGRIGV  780
ELSIEMEQQR PRDPVLRIQD MDEGGPDGVR QGKSLESGLP GSVDGFLGYI LHSSRTSSYQ  840
VDEPRNVPAD GLVPASTDIA DW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-86	FAR1 family protein