PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027150372.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB_related | ||||||||
Protein Properties | Length: 698aa MW: 77264.1 Da PI: 8.7482 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.5 | 1.2e-07 | 597 | 646 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_027150372.1 597 RRPFSVSEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 646 678999********************9988889**************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 698 aa Download sequence |
MVLQKRLDYG FNGYQVPPTP RGARSARRRG INRRITDDSQ MCAFDLLATL AGKLLLEGES 60 SPSSTDMGSS GKDQYEASKS LAKEGMLEEN KHVSNFSNQD CSDRSFIVSE LVLQAPSLNN 120 CPKELAHTQN DACSGPTSAI TTSECSEKVG SAERLISDQS NFQHGKADIE LFGCRVSPGC 180 KLDGEKKRQI KVEPNDLKLS ICARDDIYNS ESPIAWDRKP SCLVSSDESV KSLSRDHIPS 240 GSLPHNRENV NLVTRDDDEN SSGCTQPSTV NNAFRPSSHI GDRRIRKLLA SKYWKVTPNL 300 KDGEHFKTVM SSDADMKYVH HDGKNGFKRQ RSQRDFPFKK RKLYHCSSLS NLDGDICTDE 360 MYNSPGKFSN RDACASMLPK VTGPSISGAS EHAAFKSKDS QVKLKIKSFR VPEFFIEIPE 420 TATVGSLKKT VMEAVTAILS GELRVGVLLQ GKKIRDDNKT LLQTGISHDN KLDALGFTLE 480 PNLSQAPPPV SLEDHPFLLS CDSPQPLSRY PPTPSTTANA APLRGTSDAL PDPPGTNFSN 540 LVESDHDSAP SPPEMSLEKS TVDSRALVAV QAMNVEALSV VPMRKSKRSE AAQRRIRRPF 600 SVSEVEALVQ AVEKLGTGRW RDVKLRAFDN AKHRTYVDLK DKWKTLVHTA RISPQQRRGE 660 PVPQELLDRV LTAHAYWSQQ QVKPQFKQQS EACRLLST |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 282 | 288 | DRRIRKL |
2 | 328 | 343 | KRQRSQRDFPFKKRKL |
3 | 333 | 342 | QRDFPFKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07540.1 | 1e-146 | MYB_related family protein |