PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027150064.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 219aa    MW: 24904 Da    PI: 7.0303
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027150064.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.2e-31135193159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++WrKYG+K+vk++++pr+YY+C+++gC+vkk+ver+ edp+++++tYeg+Hnhe
  XP_027150064.1 135 LDDGFKWRKYGKKTVKSNPNPRNYYKCSTQGCKVKKRVERDGEDPSYLITTYEGRHNHE 193
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MFNSPFLPPP EQGISAHHGN VVPSSYASSD YLLEKYSNDH LGSHELLHYL DLPDHEEPLI  60
NNVHTDSNST LTACVYPTPF TREMTNTTGS SANCMDGMPI NCNMHESRCM RATKMAKVDQ  120
GNIIAIRTKT QLEILDDGFK WRKYGKKTVK SNPNPRNYYK CSTQGCKVKK RVERDGEDPS  180
YLITTYEGRH NHESPCFIYC DELPLAISYG WTLRPSQYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.14e-40WRKY family protein