PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027149874.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB_related | ||||||||
Protein Properties | Length: 659aa MW: 69473.8 Da PI: 6.2148 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.6 | 5.9e-08 | 199 | 243 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r++WT Ed+ l av+++G g+W+ I + Rt+ q+ rw XP_027149874.1 199 RKAWTDAEDQELMAAVRKFGEGNWANILKGDFkSDRTASQLSQRW 243 789************************874223566666666666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 659 aa Download sequence |
MGEKSKKPRK NFVTEEDIST LLQRYTATTV LTLLQEVAQV QDSKIDWNVL VKKSTTGISN 60 PREYQMLWRH LAYRDALLDR LDDAAAQPLD DDSDLECDLE AFPAVSNEAM AEAAACVKVL 120 IASGPSDPNG LTVEAPLTIN IPKGQPSKAP ENSHCNVFAQ GTNITVPVSV QKPSLPSVAS 180 AEALDSNGAA NANLPRRKRK AWTDAEDQEL MAAVRKFGEG NWANILKGDF KSDRTASQLS 240 QRWAIIKKRQ GNLTLGTGSQ LSEVQLAARR AVSLALNMPM GDTLKSSPSI SSGTNANVAH 300 SKLGPPHSNE TPSIVAPLQH DSVSTAGHQI GSSKSRVTTK KPSTKSTISS DSMVKAAAVA 360 AGARIATPSD AATLLKAAQS KNAVHIMPGG SVLKSSMAGN ANSLPSNVHF IRTGLASKPL 420 STYSTAAVSS SQNGGTQQVL GTSSKPAIPL NQPNSAGTAQ ELSAPSEVKS VAVPGPVSRL 480 ESKIVEDFGT FMCNSEKELL KENQAGFKCD GSNEQMKGDL TAVSVDTKPN QVQEDQGASE 540 NLCSDQAEGG QASVMGEILK EHASGDEVSA SANALNKKAG DLIDSQSSSM AASNGHLGPT 600 DNQASTTFDS VRKDDVMGMP VKCISDKPVK EMFENNMAKR EEGLIMDLDG NDGQANLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09710.1 | 1e-61 | MYB_related family protein |