PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027149873.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 186aa    MW: 20856.6 Da    PI: 9.4698
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027149873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.1e-203686155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa a+++a+++l+g
  XP_027149873.1 36 SHFRGVRKRP-WGRYAAEIRDpWK----KTRRWLGTFDTAEEAALAYDEAARSLRG 86
                    78********.**********883....5999**********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MDVDNLHQQH NNANATVRGG GGVQVTPSSL RVVKESHFRG VRKRPWGRYA AEIRDPWKKT  60
RRWLGTFDTA EEAALAYDEA ARSLRGPKAK TNFGSPALTP MSFTPPVMVQ VPSVNPTVLA  120
ENFPHWCSPA FFATDEADRS PERGARSEYT GYKLETIGVM MSEREMDFKG EKKPFLFDLN  180
LPAPLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.18e-27ERF family protein