PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027149737.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 462aa MW: 51564.8 Da PI: 6.4524

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027149737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.4	6.6e-10	387	426	15	54
HHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 15 LeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 L e+F +yp+ +e+ LA+++gL+++qV++WF N R + XP_027149737.1 387 LFEHFLHPSYPNDSEKLTLASQTGLSKNQVSNWFINARVR 426 56789999******************************88 PP
2	BELL	104.4	7.8e-34	250	321	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++elq+k kL+ lleeV++rY+qy++ + ++ssFe++aglg+ k+Yt+lAl+a+SrhF cL++ai +qi XP_027149737.1 250 EKHELQAKLLKLIALLEEVERRYEQYYHHMDELVSSFEMIAGLGAGKSYTALALQAMSRHFCCLREAILSQI 321 689*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MVSQDSPSNP NTSILHQFII SNSIASQNQF GGEHFDAYAN GLSGGSTYDS LGSTPSLQCF 60 GERIPRSIDI VNAPQLTDES DVNHPRHLMD LLGASNEANY HAQRLSLSLG TRTLVSPVAG 120 RQRTLNSTLV DPGYIISGDN AREACNPRGD SINSSYSFGG SVFAASSTSP NHQSSCISYG 180 TEALVVAISN SKYLRPAQWL LDEVVKVGSK AIDLSNEKYA RRLSSSSKRG SLKLRSEINL 240 EFPNNEVFTE KHELQAKLLK LIALLEEVER RYEQYYHHMD ELVSSFEMIA GLGAGKSYTA 300 LALQAMSRHF CCLREAILSQ IYVTKRKISE DMPKISSDMS QLSLFDQENR HSRLSLQQLS 360 MIQSSRQAWR PIRGLPETSV AILRSWLFEH FLHPSYPNDS EKLTLASQTG LSKNQVSNWF 420 INARVRLWKP MIEEMYKEEF AESFVESNPS ISREGFADSA ED

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MVSQDSPSNP NTSILHQFII SNSIASQNQF GGEHFDAYAN GLSGGSTYDS LGSTPSLQCF  60
GERIPRSIDI VNAPQLTDES DVNHPRHLMD LLGASNEANY HAQRLSLSLG TRTLVSPVAG  120
RQRTLNSTLV DPGYIISGDN AREACNPRGD SINSSYSFGG SVFAASSTSP NHQSSCISYG  180
TEALVVAISN SKYLRPAQWL LDEVVKVGSK AIDLSNEKYA RRLSSSSKRG SLKLRSEINL  240
EFPNNEVFTE KHELQAKLLK LIALLEEVER RYEQYYHHMD ELVSSFEMIA GLGAGKSYTA  300
LALQAMSRHF CCLREAILSQ IYVTKRKISE DMPKISSDMS QLSLFDQENR HSRLSLQQLS  360
MIQSSRQAWR PIRGLPETSV AILRSWLFEH FLHPSYPNDS EKLTLASQTG LSKNQVSNWF  420
INARVRLWKP MIEEMYKEEF AESFVESNPS ISREGFADSA ED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	8e-75	TALE family protein