PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027149289.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | TALE | ||||||||
Protein Properties | Length: 681aa MW: 75556.2 Da PI: 5.577 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.8 | 2.2e-09 | 433 | 470 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +qV +WF N R + XP_027149289.1 433 FEHflHPYPKDSEKIMLARQTGLTRSQVANWFINARVR 470 554459******************************88 PP | |||||||
2 | BELL | 114.4 | 6e-37 | 296 | 367 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er++lq+k +kL s+l+eVd+rYkqy++q+q+++ssFe+vag+g+a++Yt+lA ++iSr+FrcL+d i++qi XP_027149289.1 296 ERNDLQNKLTKLFSMLDEVDRRYKQYYQQMQVLVSSFEIVAGCGAARSYTALARRTISRQFRCLRDSIKNQI 367 7899******************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 681 aa Download sequence |
MSAYYPNLTS QQDVLQTQYL LNPKLTSYQS SDLPEIIYPN PPSTASLRPE LFSGTSLQAH 60 NFVEAQSVES REEMLFIAPH GNPVMMQPIN EHLNFAPNFS DSNAVVVDQI FTKKLLHLQN 120 ADQNLQNQGL SLSLGSQAAS SVEMPSYQNP YSNSGLSSLL SSHVEHLVDR FSESSELKTA 180 EYLSFDLAGR VNNSSKVGAV YEPQSSLSSK GINSDPKLHE ETVVSGAIYN SKYLKAAKEL 240 LDEVVNVHQA LNQSEKCNEF QSSGLGVTEA TKLKAEYQSG IPSKTGISSD VLSPAERNDL 300 QNKLTKLFSM LDEVDRRYKQ YYQQMQVLVS SFEIVAGCGA ARSYTALARR TISRQFRCLR 360 DSIKNQIQVV QQSLGEEGTV PNGQGGGLSR LRHLDQQLRQ QRALQQFGVM RQPWRPQRGL 420 PETAVSVLRA WLFEHFLHPY PKDSEKIMLA RQTGLTRSQV ANWFINARVR LWKPMIEEMY 480 KEEFVDMEAD SKSSQEHGQP TGRLKSESED TGEELHESLM SPSADGGRLA QSSELRNDVT 540 SDLKVHAYAT RMGFQAGSLE ENDMDHVNKS SRDDVVSMAD HKVGAIETIR SNQTGEVSIS 600 SDANAHNFCM LAGPVGNQVS LALGLQHPSK DSQPISDGTH TGVDDTVASS VGLDKAEYYC 660 LDAINQQERF SHPHLLSDFV L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16400.1 | 1e-100 | TALE family protein |