PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027149269.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 180aa MW: 20223.2 Da PI: 10.5464

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027149269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.5	6.4e-28	26	80	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtp LH++F++av++LGG+ +AtPk+i+ m+++ +t +h+kSHLQkYRl XP_027149269.1 26 KPRIRWTPGLHNCFIKAVDRLGGPFEATPKEIMTQMDIPEVTSSHIKSHLQKYRL 80 79****************************************************8 PP
2	Myb_DNA-binding	40.5	6.3e-13	30	79	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+ ++ +++av +lGg+ t+k I+ m t ++ks++qky+ XP_027149269.1 30 RWTPGLHNCFIKAVDRLGGPfeaTPKEIMTQMDiPEVTSSHIKSHLQKYR 79 9*******************************778**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MAAKGNDTKI LHTSDRQLQV AENTRKPRIR WTPGLHNCFI KAVDRLGGPF EATPKEIMTQ 60 MDIPEVTSSH IKSHLQKYRL RMGCNSGTAA DSTVARKAAT NTMFEADDGS NTAGWHTNEI 120 QTMWGNIKCN VMGTKTSIQA PDIKGEKGKR EQKMKMFSIW KDKMGRRSKV IIISNVHYST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	5e-19	G2-like family protein