PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027149016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bZIP | ||||||||
Protein Properties | Length: 268aa MW: 29307.7 Da PI: 9.5739 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.6 | 7.3e-15 | 196 | 240 | 4 | 48 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 r +r++kNRe+A rsR+RK+a++ eLe kv+ L +eN +L+ + XP_027149016.1 196 CHRNKRMIKNRESAARSRARKQAYTSELEIKVARLMEENAKLRRQ 240 5799**************************************954 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MDNRGSSTTS TKTKDNINTT VQISAPTSKS SSAIPTSSPI PIAPAPAPAP PSSCNSKYSM 60 EEVWKDICPS ALLHQPTSTS SSAAALEGIV FQEFLSRPSR AQYDSTSRHH HHHHPGRHSS 120 LESIDRGSFG SHSQGQPAPA ATASITLSLN ATRPPPSSSF SLPLDHDLDA DANLNPPTVE 180 FSILPEKRAS QDEDTCHRNK RMIKNRESAA RSRARKQAYT SELEIKVARL MEENAKLRRQ 240 QQEKHCLQQA PAPFPKKQML CRTLTAPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 8e-23 | bZIP family protein |