PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027148976.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

C2H2

Protein Properties

Length: 227aa MW: 25332.9 Da PI: 10.106

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027148976.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.3e-05	191	213	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C+ Cg++F+ ++L++H+ + H XP_027148976.1 191 ACSECGEVFPKIESLEHHQAVrH 213 6******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MNERGPSSLP QLRLCFVALL FMALLTSLPE PRKTPSEKTS HNNKKHPSKR RKKQQPQKPP 60 SSWDQFKNLL TCKQIEGSKV HDPSIPKLGS CSSICSFRDV VYGNTSRVVH RADNSPESSS 120 VGQETRLLSK KSSHGSSSRS FSSSLRSNGT SVTYNNGSCR GMQFRKLSGC YECHTIVDPS 180 RYPLPRTTIC ACSECGEVFP KIESLEHHQA VRHAGTLLLS FLPFLYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	5e-48	C2H2 family protein