PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027148782.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 830aa MW: 96328.6 Da PI: 8.6471

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027148782.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.8	4.7e-20	84	174	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn YAk GF +rks+ k+ +g r++vC +eg+r+e+ + ++++r+ ++ trtgC a+++vk + + k++vt++ eHnH+la XP_027148782.1 84 EFYNLYAKLSGFGIRKSNGKRD-ADGISRFRKWVCCCEGYRNEKWFNyEDRKREAKPITRTGCGACFRVKYDIeSVKYVVTRFIMEHNHPLA 174 6*************998887.8998999********9988867889999************98899************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 830 aa Download sequence
MQRRGTEVEK SKETENGRMG MDGCGRLRSF DLNQEPECDR HTFIEESGGS IGGHEDEEAN 60 ELVGAIGVDD VMKLTFDTEE EAGEFYNLYA KLSGFGIRKS NGKRDADGIS RFRKWVCCCE 120 GYRNEKWFNY EDRKREAKPI TRTGCGACFR VKYDIESVKY VVTRFIMEHN HPLASEASVQ 180 HIRSHRKVSD AEYAQAKSLK LVGARICQIM KHFVIKAGGY SNVGFCIKDL YNRMDEERRK 240 DIFNGDAEGA LGFLAAKKDA DEMFFYKYDV DNEGRLARLF WADSKSRADF SVFGDVLVFD 300 TTYKTNKYRK PLVVLAGVNN HLNSTIFGCA LLSDERIETY EWVLSTFVEA MKGRKPVAVM 360 TDGDSAMRRA IKNLLPDACH RLCSWHLHRN ARSNIRCEEF NNRLYNLMER KCSTLEFEDR 420 WARLVNECGV VENEWVKELY RRRRLWAEAY LRGNFFAGMR STQRCEKMNA FLNEYLNEKM 480 RLYEFVRSFD LAIAWLRHTE SKAIHTSENT KPVLTTILPE LEWSAAEVFT RNVFFMVRKH 540 LNRQGLLISE GWSEDGGSRT YYYSKYGGHG ISWRVDYDRS MENLICSCMK FESKGIPCAH 600 MFRVMVVEGM NRIPEACISK RWTKGVYCSN NGMKAFVADE QLTQMARYGT LKSSCNTMCY 660 YASYMDDAFN DLQQMFDKHS VDLKEKWIDR GYGGDGFAMD SRVRNDRSRR TFGLLDPRVS 720 RCKGDHKHAE AKKKRKCGHC RQGTTNEHAH TKRIRTTQQF MMIIWKIVWM TRWKNHLKLV 780 RAGATQANGE DLWLYHNHRV AVEGTQLANK EVQEKDEALL EALLRFAVTQ

Sequence ? help Back to Top

Protein Sequence Length: 830 aa Download sequence

MQRRGTEVEK SKETENGRMG MDGCGRLRSF DLNQEPECDR HTFIEESGGS IGGHEDEEAN  60
ELVGAIGVDD VMKLTFDTEE EAGEFYNLYA KLSGFGIRKS NGKRDADGIS RFRKWVCCCE  120
GYRNEKWFNY EDRKREAKPI TRTGCGACFR VKYDIESVKY VVTRFIMEHN HPLASEASVQ  180
HIRSHRKVSD AEYAQAKSLK LVGARICQIM KHFVIKAGGY SNVGFCIKDL YNRMDEERRK  240
DIFNGDAEGA LGFLAAKKDA DEMFFYKYDV DNEGRLARLF WADSKSRADF SVFGDVLVFD  300
TTYKTNKYRK PLVVLAGVNN HLNSTIFGCA LLSDERIETY EWVLSTFVEA MKGRKPVAVM  360
TDGDSAMRRA IKNLLPDACH RLCSWHLHRN ARSNIRCEEF NNRLYNLMER KCSTLEFEDR  420
WARLVNECGV VENEWVKELY RRRRLWAEAY LRGNFFAGMR STQRCEKMNA FLNEYLNEKM  480
RLYEFVRSFD LAIAWLRHTE SKAIHTSENT KPVLTTILPE LEWSAAEVFT RNVFFMVRKH  540
LNRQGLLISE GWSEDGGSRT YYYSKYGGHG ISWRVDYDRS MENLICSCMK FESKGIPCAH  600
MFRVMVVEGM NRIPEACISK RWTKGVYCSN NGMKAFVADE QLTQMARYGT LKSSCNTMCY  660
YASYMDDAFN DLQQMFDKHS VDLKEKWIDR GYGGDGFAMD SRVRNDRSRR TFGLLDPRVS  720
RCKGDHKHAE AKKKRKCGHC RQGTTNEHAH TKRIRTTQQF MMIIWKIVWM TRWKNHLKLV  780
RAGATQANGE DLWLYHNHRV AVEGTQLANK EVQEKDEALL EALLRFAVTQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	440	445	YRRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-97	FAR1 family protein