PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027148765.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 249aa    MW: 27946.3 Da    PI: 5.8197
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027148765.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR186.93e-2779167189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     kfY +YAk+vGF vr+ + ++s+++g++  r++ C+k+g++ +++ +  + +r+r + r gCka++ vk+ek+gkw+vt+++++HnH+l
  XP_027148765.1  79 KFYIDYAKKVGFVVRIMQRRRSETDGRTLARRLGCNKQGFSPNNQGSVASGKRPRCSAREGCKATILVKMEKSGKWVVTRFVKDHNHPL 167
                     6**************************************************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MSPAELIAYV DLDKEDRNRE EENNSEGKEG EDVVGEGNAE ELDANDVMDV DGNTGQLKDS  60
EVLEPYVGME FESEDAARKF YIDYAKKVGF VVRIMQRRRS ETDGRTLARR LGCNKQGFSP  120
NNQGSVASGK RPRCSAREGC KATILVKMEK SGKWVVTRFV KDHNHPLIIS ARGVSNGVRF  180
LPNVDKDKKI EQLTLELQRQ DQLCTAYRNK LLNFLASVEE QGEHLSSKIN GVIENVKKIE  240
AEIQKSSGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.14e-71FAR1 family protein