PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027148575.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 359aa MW: 39440.2 Da PI: 6.7788

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027148575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	45	3.4e-14	16	117	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104 d+e++ +L + +gk+l+ +vi++++ ++++P++Lp + wy +++k +n+ g+W+++g+ ++ + +++ g ++ XP_027148575.1 16 ADDEVI-MHLDRIRQGKPLPN-NVIDDTNPFQFNPSNLP-----TGGIWYLVGSTEKM------ENK---FGFWREKGTALDIRT-GSAISGRRT 93 699999.89*******999.99***********.....33456665555443......334...6*********9.999** PP NAM 105 tLvfykgrapkgektdWvmheyrl 128 tL f + ++ + +k++W+mhey++ XP_027148575.1 94 TLEFIEFQNAREQKSNWIMHEYKI 117 **999999********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MCPPAPDPPA DMVHGADDEV IMHLDRIRQG KPLPNNVIDD TNPFQFNPSN LPTGGIWYLV 60 GSTEKMENKF GFWREKGTAL DIRTGSAISG RRTTLEFIEF QNAREQKSNW IMHEYKITET 120 SKGKESRVMC RVLQSGGRSS NIDLRPNSRQ AVSFEQGSRS PSLKHSGVDG NKLLSEADRL 180 LEPRTREPPY MFDGDYLELD DLADPQSSST SADNSSCSSF TLDEYFDSHA LLQELEDKNN 240 QGLRETGTSS KFSVTASVPP SEVVMLPATL GSLVCTSGRQ PSVGCTAPSS VLKTQNVGER 300 IPDHTAKKPR TEKKEEDSAG SLCPAPPLGN AGKSTSKGKE KAASVNTKRL KKYMCFMPF

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MCPPAPDPPA DMVHGADDEV IMHLDRIRQG KPLPNNVIDD TNPFQFNPSN LPTGGIWYLV  60
GSTEKMENKF GFWREKGTAL DIRTGSAISG RRTTLEFIEF QNAREQKSNW IMHEYKITET  120
SKGKESRVMC RVLQSGGRSS NIDLRPNSRQ AVSFEQGSRS PSLKHSGVDG NKLLSEADRL  180
LEPRTREPPY MFDGDYLELD DLADPQSSST SADNSSCSSF TLDEYFDSHA LLQELEDKNN  240
QGLRETGTSS KFSVTASVPP SEVVMLPATL GSLVCTSGRQ PSVGCTAPSS VLKTQNVGER  300
IPDHTAKKPR TEKKEEDSAG SLCPAPPLGN AGKSTSKGKE KAASVNTKRL KKYMCFMPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	7e-13	NAC family protein