PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027148454.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 275aa    MW: 29853.9 Da    PI: 5.4077
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027148454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-18135186256
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+++AeIrd    + k  r++lg+f++ae Aa a+++a+ +++g+
  XP_027148454.1 135 SYRGVRRRP-WGKYAAEIRDsT--R-KGIRVWLGTFDSAEAAALAYDQAAFCMRGP 186
                     69*******.**********32..2.24**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEANRSLFQF HDSIILDCPF ESSSSFDSPQ PQSHSFTPSS SSSSSSLSTS SSSSSWDEVL  60
FQHNCDFLPF NFNDSQDMFL FDVLAEGAGA SARDASLRQS SSETNSNSNS NSSGGGVREE  120
EVTSNVTKET NKEKSYRGVR RRPWGKYAAE IRDSTRKGIR VWLGTFDSAE AAALAYDQAA  180
FCMRGPMAVL NFPVDVVQES LRDMKCGSEG GGGGGSPVVA LKHRHSIKKK KSSIRNHKIA  240
REAAAKVENV VILEDLGAEY LEELLNSSSE IPAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-33ERF family protein