PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027148312.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 300aa    MW: 33530.4 Da    PI: 6.2357
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027148312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.29.9e-51101381129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF P+deelv++yL kk+++ +++  +++ e+d++++ePw+Lp  +k +++ewyfFs rd+kyatg r+nrat++gyWkatgkd++vl+ 
  XP_027148312.1  10 LPPGFRFYPSDEELVCHYLYKKIANGEVSR-DTLVEIDLHTCEPWQLPDVAKLNSNEWYFFSFRDRKYATGFRTNRATTTGYWKATGKDRTVLDP 103
                     79*************************999.88***************87778899**************************************9 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129
                      +++ vg++ktLvfy++rap+g kt W+mhe+rle
  XP_027148312.1 104 tRRSIVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 138
                     77788***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KIANGEVSRD TLVEIDLHTC EPWQLPDVAK  60
LNSNEWYFFS FRDRKYATGF RTNRATTTGY WKATGKDRTV LDPTRRSIVG MRKTLVFYRN  120
RAPNGIKTGW IMHEFRLENP HVPPKEDWVL CRVFHKAKVE SVDNDVYDAT AGGGGCGGGG  180
DISPTFAASP PNIDHCTTGG YNQNSSFSQS PPHQSQNSSS TAALPNMMSA VLGRNYLQSS  240
SQELCVTPSR NDQMVHSKSE LDEYGFLFNM NFGEANLRDG GVPSGLEEMH FDDDSSLVFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.15e-90NAC family protein