PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026460539.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 271aa    MW: 30159 Da    PI: 8.4823
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026460539.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.23e-20150184135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++
  XP_026460539.1 150 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 184
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MYRCTGSHCN QVGLCSCSLF HSSANNSFSM LFSPSNPNNT HYQYGNEVDD HQHQYYQYPA  60
PSSSSVDCTL SLGTPSTRQS KSNSNNSRNS ISKGRSSTSC IWDIFQTKKT IPPPQTTTIK  120
GSRGGTSTNS GNNNSILSNI SGDSLLARRC ANCDTTSTPL WRNGPRGPKS LCNACGIRYK  180
KEERRASNNN AAAAQSSVMD QQYITSHQYS WPTHQQHTNQ KLSSAHLGNE FMFVQEDDHH  240
QYQRESDSGI PFLSWRLNVP ERPGLVHDYT C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.13e-33GATA family protein