PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026460435.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 364aa MW: 41088.2 Da PI: 6.5877 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.8 | 1.7e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++++++ G+g +W + ++++g++R++k+c++rw++yl XP_026460435.1 14 KGPWSPEEDAKLKKYIEESGTGgNWIALPQKVGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 36.4 | 1.2e-11 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eE+ ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_026460435.1 69 GGFSEEEENIICSLYVSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 364 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDAKLKKYIE ESGTGGNWIA LPQKVGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEENIIC SLYVSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEQQARRL GCLKQEMKKV MSTTGTFNMV SLSDHNRNYN QYVIPTHQNQ PHIPIPMPYP 180 AQDPAGYMID NNDPIRKLLI KLGGRFCDDQ NNQLLVHNDI GMSAGNDLYC PTLNISPTQE 240 QLYENSPHLA NDQYDIDGVN NLSMLQGLNC YQPVHDVDQM AYYNSQGLDG FYGEDNMGNN 300 GYTSAGTSSV ESANWADMAS LVYTPNTVIT SDNYVPQDCN DHQQPGRMLK DCHDFEGDSS 360 FLIM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G49690.1 | 2e-78 | MYB family protein |