PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456944.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SRS

Protein Properties

Length: 351aa MW: 37780.3 Da PI: 8.2516

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	215.6	1.1e-66	101	257	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaas..krkrel...kskkqsalsstkls 92 gt+sCqdCGnqakkdC+h+RCRtCCksrgf+C thvkstWvpa++rrerqqql++ ++ +++++++ +r++ +++++ +s +l+ XP_026456944.1 101 GGTTSCQDCGNQAKKDCTHMRCRTCCKSRGFHCPTHVKSTWVPASRRRERQQQLSSIHQGGRSDRDDERVvvVLDRDHistTNTSKRPRESHRLP 195 6899*************************************************9988887777444331133444421122333334556666 PP DUF702 93 saeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++++ + +P+ev+s+a frcvrvs++d++ee++aYqtav+igGhvfkGiLydqG+e+ XP_026456944.1 196 ATNTTGLEVGNVFPAEVNSAATFRCVRVSAMDEAEEQYAYQTAVNIGGHVFKGILYDQGPES 257 666666666666**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MAGFSLGRSS ARNQSQEIPP ETLFLYRSGE IPSSTYNNSS KGFELWQEHN QHQNIYASSS 60 VALEVGLASG NRRSNVSDEL SNRAGTTMMM RQGGEGSGDR GGTTSCQDCG NQAKKDCTHM 120 RCRTCCKSRG FHCPTHVKST WVPASRRRER QQQLSSIHQG GRSDRDDERV VVVLDRDHIS 180 TTNTSKRPRE SHRLPATNTT GLEVGNVFPA EVNSAATFRC VRVSAMDEAE EQYAYQTAVN 240 IGGHVFKGIL YDQGPESHHA HHHGGQTSTS GAGGSESGGA GTGGGAITSS GRNFITAPHN 300 HPHMQQQQQP SSSSATTSGA AALLVDPSSM YPGTPFNTFV AGTQFFPHPR S

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MAGFSLGRSS ARNQSQEIPP ETLFLYRSGE IPSSTYNNSS KGFELWQEHN QHQNIYASSS  60
VALEVGLASG NRRSNVSDEL SNRAGTTMMM RQGGEGSGDR GGTTSCQDCG NQAKKDCTHM  120
RCRTCCKSRG FHCPTHVKST WVPASRRRER QQQLSSIHQG GRSDRDDERV VVVLDRDHIS  180
TTNTSKRPRE SHRLPATNTT GLEVGNVFPA EVNSAATFRC VRVSAMDEAE EQYAYQTAVN  240
IGGHVFKGIL YDQGPESHHA HHHGGQTSTS GAGGSESGGA GTGGGAITSS GRNFITAPHN  300
HPHMQQQQQP SSSSATTSGA AALLVDPSSM YPGTPFNTFV AGTQFFPHPR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	2e-55	SRS family protein