PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026455938.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 381aa MW: 41128.7 Da PI: 8.3023

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026455938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.9	6.4e-20	20	65	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+++G+++W++I++ ++ gR++k+c++rw + XP_026455938.1 20 KGPWSPEEDESLTKLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 65 79****************************.*********985 PP
2	Myb_DNA-binding	52.8	9.4e-17	74	116	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T eEd+ +++a++++G++ W+tIar + gRt++ +k++w++ XP_026455938.1 74 AFTSEEDDTIIRAHAKFGNK-WATIARLLS-GRTDNAIKNHWNST 116 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MASSSWFSKR DSNSNQDRIK GPWSPEEDES LTKLVQKHGP RNWSLISKSI PGRSGKSCRL 60 RWCNQLSPQV EHRAFTSEED DTIIRAHAKF GNKWATIARL LSGRTDNAIK NHWNSTLKRK 120 CSSMLDDGSG SEGGGGGCNE EPPLKRSVSL DAAQPNFSGG GIFFNNDNNP GSPCGSDLSD 180 SSLPPATLLS SSHIFRPVAR AGAGVVSPMQ TTSNSISSAM NDPPTSLSLS LPGSDSSCDG 240 FNHISGSTLS RMNGSDSSND GFNHVKVNPT NQQLQIVIPS PPPAPQVQLQ QSTTPLPPPT 300 PTQVQPNQFT DMRSSLVRNQ DIEKPFPHFN SEFLSVMQEM IKKEVRSYMS GLEQSGGFCF 360 QGGDGGIRNV GVKRIGVSKI E

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MASSSWFSKR DSNSNQDRIK GPWSPEEDES LTKLVQKHGP RNWSLISKSI PGRSGKSCRL  60
RWCNQLSPQV EHRAFTSEED DTIIRAHAKF GNKWATIARL LSGRTDNAIK NHWNSTLKRK  120
CSSMLDDGSG SEGGGGGCNE EPPLKRSVSL DAAQPNFSGG GIFFNNDNNP GSPCGSDLSD  180
SSLPPATLLS SSHIFRPVAR AGAGVVSPMQ TTSNSISSAM NDPPTSLSLS LPGSDSSCDG  240
FNHISGSTLS RMNGSDSSND GFNHVKVNPT NQQLQIVIPS PPPAPQVQLQ QSTTPLPPPT  300
PTQVQPNQFT DMRSSLVRNQ DIEKPFPHFN SEFLSVMQEM IKKEVRSYMS GLEQSGGFCF  360
QGGDGGIRNV GVKRIGVSKI E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-69	MYB family protein