PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026455023.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 292aa MW: 33652 Da PI: 8.4066 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56 | 9.2e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++++k +G g+W++ ++ g+ R++k+c++rw +yl XP_026455023.1 14 KGAWTKEEDQRLINYIKTHGEGCWRSLPKSAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 59.4 | 7.9e-19 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEde++++++ +lG++ W++Ia +++ gRt++++k++w+++ XP_026455023.1 67 RGNFTEEEDEIIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDQRLINYIK THGEGCWRSL PKSAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDEIIIK LHSLLGNKWS LIAGRLPGRT DNEIKNYWNT HIKRKLINRG 120 IDPNSHKPIK NSNVITTTTN VSSNYSVYDR DHANIITPIV KADAEEANSS TSTGTTTEEL 180 LFQRDHHVRN YNERKQELNF PDLNLDLSIS LPTQECESKK QDDHHQEEKK GLLYQVFDKS 240 SVVTPMATQT VCLCYQLGFQ RREACGCKNM IMNDTTTMMN NGFNWYIRPL DS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 4e-92 | MYB family protein |