PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026454278.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 216aa MW: 23924.3 Da PI: 6.5188 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.7 | 8.4e-11 | 11 | 54 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W+ e d+ + +a + ++ g +W++Ia ++ g+tl+++ks++ XP_026454278.1 11 TWSREQDKAFENALAIHPEGtenRWEKIAVEVT-GKTLEDVKSHY 54 7*******************************9.**********9 PP | |||||||
2 | Myb_DNA-binding | 45.6 | 1.6e-14 | 119 | 163 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r +Rt+ q+ s+ qky XP_026454278.1 119 AWTEEEHRLFLLGLEKYGKGDWRSISRNYVVTRTPTQVASHAQKY 163 6*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MTADETSESS TWSREQDKAF ENALAIHPEG TENRWEKIAV EVTGKTLEDV KSHYDILVED 60 ISGIEAGLVP VPCYVSSPEG SVEHVGEGGA SRKDENSQGN SNHKGKASRL DQERRKGIAW 120 TEEEHRLFLL GLEKYGKGDW RSISRNYVVT RTPTQVASHA QKYFIRLSNS MNKDRRRSSI 180 HDITSVGDAE NISTTSRGPI TGQTNGHFTA GPRAVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 5e-93 | MYB family protein |