PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453652.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 368aa MW: 42355.8 Da PI: 4.5197

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	3.9e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++ +G g+W+++++ g+ R++k+c++rw +yl XP_026453652.1 14 KGLWSPEEDEKLFNYITTFGVGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	51.7	2e-16	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE++l+v+++++lG++ W+ Ia +++ gRt++++k++w++ XP_026453652.1 67 RGMFSQEEEDLIVNLHQLLGNR-WAQIATKLP-GRTDNEIKNFWNS 110 788*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MGRHSCCLTQ KLRKGLWSPE EDEKLFNYIT TFGVGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDVKRGMF SQEEEDLIVN LHQLLGNRWA QIATKLPGRT DNEIKNFWNS CIKKKLKQQG 120 IDPNTHMPLS ETKECGNENL QTSSTEMGQA MVINNSSVFR NRLISTDQAH YPDEDFMNKQ 180 VFDPFSSFES QMGSDQTGSS SKSSILSQYH SEQSYRDNYE FGFSPMPNLT YDCDHSNDMT 240 DSMATDISES SSSRMSNLFL NETKECSGSS SCNVLNIQDN ELHMMDNNMM EKSAFSWDIT 300 EETNKLESTF QEFQFNGVKS EEVEEEEMKI NSWEVEDHTQ HGRSYSSENL VNFPLTSLSE 360 DLEYFEQI

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MGRHSCCLTQ KLRKGLWSPE EDEKLFNYIT TFGVGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDVKRGMF SQEEEDLIVN LHQLLGNRWA QIATKLPGRT DNEIKNFWNS CIKKKLKQQG  120
IDPNTHMPLS ETKECGNENL QTSSTEMGQA MVINNSSVFR NRLISTDQAH YPDEDFMNKQ  180
VFDPFSSFES QMGSDQTGSS SKSSILSQYH SEQSYRDNYE FGFSPMPNLT YDCDHSNDMT  240
DSMATDISES SSSRMSNLFL NETKECSGSS SCNVLNIQDN ELHMMDNNMM EKSAFSWDIT  300
EETNKLESTF QEFQFNGVKS EEVEEEEMKI NSWEVEDHTQ HGRSYSSENL VNFPLTSLSE  360
DLEYFEQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	1e-79	MYB family protein