PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453591.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 356aa MW: 40423.1 Da PI: 5.8783

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l d++++ G g+W++ ++ g++R++k+c++rw +yl XP_026453591.1 14 KGPWTPEEDQKLTDYIHKNGHGSWRALPKLAGLNRCGKSCRLRWSNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.1	7.4e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++l++ ++ lG++ W+ Ia +++ gRt++++k++w+++l XP_026453591.1 67 RGKFSDDEEQLIISLHSVLGNK-WSQIATHLP-GRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MGRSPSRDEI GLKKGPWTPE EDQKLTDYIH KNGHGSWRAL PKLAGLNRCG KSCRLRWSNY 60 LRPDIKRGKF SDDEEQLIIS LHSVLGNKWS QIATHLPGRT DNEIKNYWNT HLKKKLLQMG 120 IDPVTHRPRT DLNLLSNLPN LLAAANIFNL MNPWDNVSRL HVDAQAQVAK VQLLNNLLQV 180 ISNGGSSSIQ PPNMELLNHL RSVPNRDNNY LINQYLEPNS QLLNALGYSS NPSSQTPPPY 240 NFSNSKYPNV PNENENVAVE EVDCYRFEQG SSSRMVSNNY LNDNNMNVQD YLSSPEYIPA 300 LVSASPERNM NNIIKPEINT TTNSSTSTTF ETTAWGELNM DDEENILSDY WTELLE

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MGRSPSRDEI GLKKGPWTPE EDQKLTDYIH KNGHGSWRAL PKLAGLNRCG KSCRLRWSNY  60
LRPDIKRGKF SDDEEQLIIS LHSVLGNKWS QIATHLPGRT DNEIKNYWNT HLKKKLLQMG  120
IDPVTHRPRT DLNLLSNLPN LLAAANIFNL MNPWDNVSRL HVDAQAQVAK VQLLNNLLQV  180
ISNGGSSSIQ PPNMELLNHL RSVPNRDNNY LINQYLEPNS QLLNALGYSS NPSSQTPPPY  240
NFSNSKYPNV PNENENVAVE EVDCYRFEQG SSSRMVSNNY LNDNNMNVQD YLSSPEYIPA  300
LVSASPERNM NNIIKPEINT TTNSSTSTTF ETTAWGELNM DDEENILSDY WTELLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-81	MYB family protein