PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453547.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 358aa MW: 40673.2 Da PI: 5.7956

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453547.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.7	2e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l +++++G+g+W++++ g+ R+ k+c++rw +yl XP_026453547.1 15 KGPWTPEEDLILSSYIEEHGPGNWRSVPTNAGLPRCSKSCRLRWSNYL 62 79****************************99**********97 PP
2	Myb_DNA-binding	43.9	5.5e-14	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+++++ + ++G++ W++Ia+ ++ Rt++++k++w+++l XP_026453547.1 68 RGNFTELEEKKIITLQSLWGNK-WAAIASNLP-QRTDNDIKNYWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MGRPPCCDKV LGIKKGPWTP EEDLILSSYI EEHGPGNWRS VPTNAGLPRC SKSCRLRWSN 60 YLRPGIKRGN FTELEEKKII TLQSLWGNKW AAIASNLPQR TDNDIKNYWN THLKKKLKKF 120 HSVLHPHHLG SSSKSFEFLN KDYRRSYDRT SFEYHRLIHQ ASSLNKFISS TITNSITSWS 180 SSTTTTYASS TGNISRLLEG WMRTSPNKLK DSSILKLLTT QTEEEVLPGG SDNSNNDNHN 240 TSNNKLVDDD NLLIKKVEVQ ETCNGDDYLI SNEADYFESL LTFDSTTIHE STSAPSKEPQ 300 TTNTTLEDRV DSITETNHQG LVEDDQDQPP FSLLEKWLLD EATGQILEED QMEISPIC

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MGRPPCCDKV LGIKKGPWTP EEDLILSSYI EEHGPGNWRS VPTNAGLPRC SKSCRLRWSN  60
YLRPGIKRGN FTELEEKKII TLQSLWGNKW AAIASNLPQR TDNDIKNYWN THLKKKLKKF  120
HSVLHPHHLG SSSKSFEFLN KDYRRSYDRT SFEYHRLIHQ ASSLNKFISS TITNSITSWS  180
SSTTTTYASS TGNISRLLEG WMRTSPNKLK DSSILKLLTT QTEEEVLPGG SDNSNNDNHN  240
TSNNKLVDDD NLLIKKVEVQ ETCNGDDYLI SNEADYFESL LTFDSTTIHE STSAPSKEPQ  300
TTNTTLEDRV DSITETNHQG LVEDDQDQPP FSLLEKWLLD EATGQILEED QMEISPIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	2e-73	MYB family protein