PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453546.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 354aa MW: 40386.8 Da PI: 5.0041

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.1	1.1e-14	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++k+ G+ +W++++ g+ R+ k+c++rw +yl XP_026453546.1 15 KGPWTPEEDLILASYIKEKGPVNWRSVPTNTGLLRCSKSCRLRWSNYL 62 79****************99******99**********97 PP
2	Myb_DNA-binding	43.9	5.4e-14	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+++++ + ++G++ W++Ia+ ++ Rt++++k++w+++l XP_026453546.1 68 RGNFTELEEKKIITLQSLWGNK-WAAIASNLP-QRTDNDIKNYWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MGRPPCCDKV LGIKKGPWTP EEDLILASYI KEKGPVNWRS VPTNTGLLRC SKSCRLRWSN 60 YLRPGIKRGN FTELEEKKII TLQSLWGNKW AAIASNLPQR TDNDIKNYWN THLKKKLNKF 120 HSVLRPHHLE SSSKSFEFLN EDYRSSYDRT RNLDSSITSW SSSTTTTYAS STGNISRLLE 180 GWMKTSPNKL KDSSTLKLKT TQEEKEVPPD GSDNSNNDNH KTSNSNLDDD DNLLIKKVEV 240 QETCNRDDYL ISNEEDYLES LLTFETISTM ACSEQKSSSD STTIHGSTSE PPKEPQTTTT 300 PMEDRVDSTT ESNRQGWIED DQNQPPFSLL EKWLLDEATG QVLEEDQMEI SPIF

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MGRPPCCDKV LGIKKGPWTP EEDLILASYI KEKGPVNWRS VPTNTGLLRC SKSCRLRWSN  60
YLRPGIKRGN FTELEEKKII TLQSLWGNKW AAIASNLPQR TDNDIKNYWN THLKKKLNKF  120
HSVLRPHHLE SSSKSFEFLN EDYRSSYDRT RNLDSSITSW SSSTTTTYAS STGNISRLLE  180
GWMKTSPNKL KDSSTLKLKT TQEEKEVPPD GSDNSNNDNH KTSNSNLDDD DNLLIKKVEV  240
QETCNRDDYL ISNEEDYLES LLTFETISTM ACSEQKSSSD STTIHGSTSE PPKEPQTTTT  300
PMEDRVDSTT ESNRQGWIED DQNQPPFSLL EKWLLDEATG QVLEEDQMEI SPIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	2e-75	MYB family protein