PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453279.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 262aa MW: 29643.7 Da PI: 6.6646

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.9	1.5e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+d+++++G+ +W + +++ g++R++k+c++rw++yl XP_026453279.1 14 RGPWSPEEDTTLKDYIRRHGTVsNWISLPQKAGLKRCGKSCRLRWLNYL 62 89****************88***********************97 PP
2	Myb_DNA-binding	44.3	4.2e-14	71	111	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++eEd ++ + k G++ W+tIa++++ gRt++++k++w++ XP_026453279.1 71 YSEEEDNIICTLYKNIGSR-WSTIASHLP-GRTDNDVKNYWNT 111 69***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDTTLKDYIR RHGTVSNWIS LPQKAGLKRC GKSCRLRWLN 60 YLRPDIKHGG YSEEEDNIIC TLYKNIGSRW STIASHLPGR TDNDVKNYWN TKLKKKLMAP 120 ATTTPSKPNY LLNTNSNNQI HQQLTSFSSP SLTDPPPLTN LYATTPEMDN HIQVSDFSYS 180 PDFGSDNQKQ DSNLVYELGS LTSQAISNLY YPNYYYFTSS TTWSNDNATI DNGSGASGEE 240 YDSLFKEFGF DPSSSSDYFW IA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	8e-72	MYB family protein