PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026452795.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 326aa MW: 36779 Da PI: 7.1885 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.4 | 1.6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W++++r g+ R++k+c++rw +yl XP_026452795.1 14 RGLWSPEEDEKLINYITTHGHGCWSSVPRLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 43.6 | 6.6e-14 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++ E l++++++ lG++ W+ Ia++++ gRt++++k++w+ XP_026452795.1 67 RGSFSHNEASLILELHRVLGNR-WAQIAKHLP-GRTDNEVKNFWN 109 899*******************.*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 326 aa Download sequence |
MGHHSCCNKQ KVRRGLWSPE EDEKLINYIT THGHGCWSSV PRLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SHNEASLILE LHRVLGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLISPP 120 RNHHNHTTET TTVFPMSSSH VNTPASTSNE GLLSSVLVST NTTNTNFTFS DHNQRPKHVY 180 DILSSPTSLV QSFDQGIEFT KDPVYLNVDW VSMPQTSQPL LYDPTWSSFD IDNHMHTNTD 240 STALINPHDN LHGDQKIEEF INGNECRILS STNTSHGQVD QSSTGIAPCH FPTHQPFLYD 300 PANLLNNQLE CADLIFIPSS SATPSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G13890.2 | 5e-76 | MYB family protein |