PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452610.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 358aa MW: 40208.2 Da PI: 6.4227

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.4e-17	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv ++++G g+W++ ++ g++R++k+c++rw +yl XP_026452610.1 15 KGPWTPEEDQKLVIHIQLHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	55.6	1.2e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia +++ gRt++++k++w+++l XP_026452610.1 68 RGKFSQEEEQTILNLHSILGNK-WSAIATHLP-GRTDNEIKNFWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MGRSPSRDEN NGLKKGPWTP EEDQKLVIHI QLHGHGSWRA LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSQEEEQTIL NLHSILGNKW SAIATHLPGR TDNEIKNFWN THLKKKLIQM 120 GFDPMTHRPR TDLFSSLPQL IALASLKEFM DNNNQLPYEE LISRLVQTEA VNEMVRVRYI 180 QSILQSNILA TTNYPTNIAD NVQAFILLNS LSLIKENSTS SMVNSLPQLD NMAAIPYNDH 240 DLPQLQDYSC NNFQTSLGDF RRDIIASQGG SDFALLNEGE NITPKTSLGF PSSPADDCIR 300 PTPPTAHRND RSASSLGESS DACSTNTTMT TTNAIYGGEV PSLFWPELYS VEDPSFYP

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MGRSPSRDEN NGLKKGPWTP EEDQKLVIHI QLHGHGSWRA LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FSQEEEQTIL NLHSILGNKW SAIATHLPGR TDNEIKNFWN THLKKKLIQM  120
GFDPMTHRPR TDLFSSLPQL IALASLKEFM DNNNQLPYEE LISRLVQTEA VNEMVRVRYI  180
QSILQSNILA TTNYPTNIAD NVQAFILLNS LSLIKENSTS SMVNSLPQLD NMAAIPYNDH  240
DLPQLQDYSC NNFQTSLGDF RRDIIASQGG SDFALLNEGE NITPKTSLGF PSSPADDCIR  300
PTPPTAHRND RSASSLGESS DACSTNTTMT TTNAIYGGEV PSLFWPELYS VEDPSFYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10280.1	3e-96	MYB family protein