PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452214.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 377aa MW: 42472.1 Da PI: 6.8411

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	6.1e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+e+d++l+ +++ +G+g+W++++ g+ R+ k+c++rw +yl XP_026452214.1 15 KGPWTPEDDLILASYIEGHGPGNWRSVPTNAGLSRCSKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	41.7	2.7e-13	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ ++ + +++G++ W++Ia+ ++ Rt++++k++w+++l XP_026452214.1 68 RGNFTELEENNIITLQRLWGNK-WAAIASNLP-QRTDNDIKNYWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MGRPPCCDKV LGIKKGPWTP EDDLILASYI EGHGPGNWRS VPTNAGLSRC SKSCRLRWTN 60 YLRPGIKRGN FTELEENNII TLQRLWGNKW AAIASNLPQR TDNDIKNYWN THLKKKLKNK 120 FRSHHLGSSS ISLQFLNKDC RTLSHDRISN LEYHHLSIHQ NSALNKFIST ITSSSTSTPS 180 SSTTYASSTE NISRLLEDWV KNSPNKFSSG ALKLKTTQTE EKVLPSGSNN SDNNNPNNGN 240 NNPYNYDDLL IKKFEVQETC NGNDYVICNE ADYFESLLTF EKINMACWEQ KSSSDSTTTI 300 HGSTSASPEE PQTTTVTTKA ATPIKDRVNS NSGSDHQGLV VDDQNQRPPF SLLEKWLLDE 360 ATDQVLEEDQ MEIYPTF

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MGRPPCCDKV LGIKKGPWTP EDDLILASYI EGHGPGNWRS VPTNAGLSRC SKSCRLRWTN  60
YLRPGIKRGN FTELEENNII TLQRLWGNKW AAIASNLPQR TDNDIKNYWN THLKKKLKNK  120
FRSHHLGSSS ISLQFLNKDC RTLSHDRISN LEYHHLSIHQ NSALNKFIST ITSSSTSTPS  180
SSTTYASSTE NISRLLEDWV KNSPNKFSSG ALKLKTTQTE EKVLPSGSNN SDNNNPNNGN  240
NNPYNYDDLL IKKFEVQETC NGNDYVICNE ADYFESLLTF EKINMACWEQ KSSSDSTTTI  300
HGSTSASPEE PQTTTVTTKA ATPIKDRVNS NSGSDHQGLV VDDQNQRPPF SLLEKWLLDE  360
ATDQVLEEDQ MEIYPTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	3e-70	MYB family protein