PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026451435.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 482aa MW: 55003.5 Da PI: 7.8931

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026451435.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.4	1.2e-16	203	249	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll+++v q+G++ W+ Ia+t+ gR +kqc++rw+++l XP_026451435.1 203 KGQWTMEEDRLLLHLVGQFGMRKWSQIAQTLR-GRIGKQCRERWHNHL 249 799***************************.***********97 PP
2	Myb_DNA-binding	49.6	8.8e-16	255	297	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ WT++Ed +l++ + + G++ W+ Ia++++ gRt++++k++w+ XP_026451435.1 255 KDVWTEDEDRILIQSHIEIGNK-WAEIAKRLP-GRTENSIKNHWN 297 578*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MEFEPRYGED FLYKQNILGE NYLKPDFGYG FSMGACNDSR GVIQDIPKLD QFSLDGCFRN 60 SNLGMSNPSP PLPPSTRYVD SPSQVFSNGN SIMQDFDVFE YKPLLEGGGS TNSSSNVSNG 120 GLFHQNKGFF HYPSIMDRNH PSHLSPTLSF QELEQGNLSI PDEFSCITAD NGIYGEAAVK 180 KRNSPEKRRS AVKGAQRRSN VIKGQWTMEE DRLLLHLVGQ FGMRKWSQIA QTLRGRIGKQ 240 CRERWHNHLR PNIKKDVWTE DEDRILIQSH IEIGNKWAEI AKRLPGRTEN SIKNHWNATK 300 RRQFSRRRCR SSKYPRSSSL LQNYIKSLGA DPTSASNTEY RKNAFVTSNT PTESNSNNTA 360 ATNIDSTKMP MSTQPALMKQ PADRSQHKLD MFNNLSEDRL VPSYDFNDVT DFGFDTKTFP 420 VKYSLGSLFD EMPSGNIFGD DQNMEINMPA EMDLYMQQNH HEVKREMDLV EMVNQTTTGR 480 MC

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MEFEPRYGED FLYKQNILGE NYLKPDFGYG FSMGACNDSR GVIQDIPKLD QFSLDGCFRN  60
SNLGMSNPSP PLPPSTRYVD SPSQVFSNGN SIMQDFDVFE YKPLLEGGGS TNSSSNVSNG  120
GLFHQNKGFF HYPSIMDRNH PSHLSPTLSF QELEQGNLSI PDEFSCITAD NGIYGEAAVK  180
KRNSPEKRRS AVKGAQRRSN VIKGQWTMEE DRLLLHLVGQ FGMRKWSQIA QTLRGRIGKQ  240
CRERWHNHLR PNIKKDVWTE DEDRILIQSH IEIGNKWAEI AKRLPGRTEN SIKNHWNATK  300
RRQFSRRRCR SSKYPRSSSL LQNYIKSLGA DPTSASNTEY RKNAFVTSNT PTESNSNNTA  360
ATNIDSTKMP MSTQPALMKQ PADRSQHKLD MFNNLSEDRL VPSYDFNDVT DFGFDTKTFP  420
VKYSLGSLFD EMPSGNIFGD DQNMEINMPA EMDLYMQQNH HEVKREMDLV EMVNQTTTGR  480
MC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-68	MYB family protein