PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026450825.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 320aa    MW: 35904.6 Da    PI: 6.99
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026450825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.3e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
   XP_026450825.1 14 KGPWTPEEDIILVSYIQEHGSGNWRSVPTNTGLQRCSKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding39.61.2e-1267112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+  +++++ +   lG++ W++Ia+ ++  Rt++++k++w+++l
   XP_026450825.1  67 RGNFTELQEKIIISLQSFLGNK-WAAIASNLP-ERTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ EHGSGNWRSV PTNTGLQRCS KSCRLRWTNY  60
LRPGIRRGNF TELQEKIIIS LQSFLGNKWA AIASNLPERT DNDIKNYWNT HLKKKLNKFH  120
LGSSYSSDSS TSFQSINQDC STQDKFISSS HRSRSSTTTY ASSTGNSSRL LEGWMKTTPK  180
KLTSCTFKLK TTQTEEKGLP NGSNNSNKEN HNTSNSDNNY FESLLTFEKT SDTACWRQKL  240
SSDSTATHGS TSTSPEEPQT TTSTTTAIED RVDSISESDH HGLIGDDLNH PPFSLLEKWL  300
LEETTGQVLE EDPMEISPIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.12e-78MYB family protein