PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026450822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 345aa MW: 38738.7 Da PI: 5.464 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.1 | 7.3e-17 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++ +G+g+W++++ g+ R+ k+c++rw +yl XP_026450822.1 15 KGPWTPEEDLILASYIEGHGPGNWRSVPTNAGLSRCSKSCRLRWTNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 35.4 | 2.5e-11 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+ E+ ++ + +++G++ W++Ia+ ++ Rt++++ ++w+ + XP_026450822.1 68 RGNFTELEENNIITLQRLWGNK-WAAIASNLP-QRTDNDINNYWNAH 112 89********************.*********.***********977 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 345 aa Download sequence |
MGRPPCCDKV LGIKKGPWTP EEDLILASYI EGHGPGNWRS VPTNAGLSRC SKSCRLRWTN 60 YLRPGIKRGN FTELEENNII TLQRLWGNKW AAIASNLPQR TDNDINNYWN AHRKKKLKNK 120 FRSHHLGSSS TSLQFLNKNF TSSSTSTPSS TTYASSTENI SRLLEDCVKN SPNKFSSGAL 180 KLKTTQTEEK VLPSGSNNSD NNNPNNGNNN PYNYDELLIK KFEVQDTCNS DDYVISNEAD 240 YFESLFPFES TSIGCWEQKS SSDSSTTIHD STSPSPEEPQ TTTITTTAAT PTEDRVNSIS 300 GSDHQGMIVD DQNQRPPFSL LEKWLLDEAT VQVLEEDQME IYPKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G08810.1 | 1e-69 | MYB family protein |